PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023518495.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | Dof | ||||||||
Protein Properties | Length: 251aa MW: 25574.4 Da PI: 7.9714 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122.8 | 1.2e-38 | 26 | 86 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCk+CrryWt+GG+lr++PvGgg+rkn k+s XP_023518495.1 26 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRS 86 57889****************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MPSDAADHLK TATKPLASGG LCPPPEQEHL PCPRCDSTNT KFCYYNNYNF SQPRHFCKSC 60 RRYWTHGGTL RDIPVGGGSR KNAKRSRTCI PAAAAAATSV VSSSSGSLTN SVSQLDHHSL 120 PATPFLVPLV GGHSGGLQFG GGGGGGELKA GGNMCGSFTS LLNNHAPGFW SLGGFGLGLG 180 SGFEDVGYGA ASSRVAWPFL GLGDGSTGVG GHGGAANTWQ FENGDAAGFV GAADCLSWPE 240 LAISTPGNGL K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 2e-49 | Dof family protein |