PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023518423.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 232aa MW: 26503.7 Da PI: 7.8426 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.2 | 0.00013 | 69 | 91 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ F++ L H+++H XP_023518423.1 69 YSCSFCKREFRSAQALGGHMNVH 91 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 232 aa Download sequence |
MEMEPKPCWM MWEDNKKNKN KNKNENRLTT ASDHLNNKAS SFDDSWEEQA FADDASGRLG 60 GCVWPPRFYS CSFCKREFRS AQALGGHMNV HRRDRAMLKH ESFKPQIETH LQIPPKNNPF 120 TSLIDLPQHP SSQFVCDENL AFNPNPKSSQ NSVDESDHKW RQSLDLSIKT TDLFKDDAVC 180 CKRKRSDHHS TSTVAFVLRS EVIGLSHSSI EDLDLELRLG DGGGSRTKPK LK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06070.1 | 2e-25 | C2H2 family protein |