PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518322.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 327aa MW: 34301.1 Da PI: 9.4195

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.9	5.4e-39	58	116	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rkn+++ XP_023518322.1 58 AQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRTA 116 67899***************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MIQELFGVSG LLAAPPGDPK ISINASILDS SPSTSLSAPT STANTATPTP TATSNSEAQN 60 LRCPRCDSSN TKFCYYNNYN LTQPRHFCKT CRRYWTKGGA LRNVPIGGGC RKNRTAAATV 120 VKSAAAKMKT VSSDIFGRVG FGNGSALDTQ LISPTQILWG SPQNAHLLAV LRSATQNQNP 180 NPKSLARSHV INGPPAASAT ATTTTTPFHA RTMGFDPVNH ISSLGLCSSY WRNNHTQVLH 240 QQNGHIHGSG DHVSGGTTGI QELYQKLKSS SSNYFTDGQQ GSVGVTSVGT AAILETSPVG 300 GGETAAGYWN PTFSCSDVHA SANGAYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51700.1	1e-33	Dof family protein