PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023518070.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 260aa    MW: 28299.8 Da    PI: 6.3595
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023518070.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.61.5e-183584255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      k+ r +lg+f taeeAa+a+++a+  l+g
  XP_023518070.1 35 KFVGVRQRP-SGRWVAEIKDtT----KKIRMWLGTFETAEEAARAYDEAACLLRG 84
                    799******.7*********33....36**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MEIHFQSPGT HGGATASLGK SSKFKGRTRG NNANKFVGVR QRPSGRWVAE IKDTTKKIRM  60
WLGTFETAEE AARAYDEAAC LLRGSNTRTN FIPQISTNSP IASRIRSLLN SRKNPILNPL  120
KNHSAAAAAA PIIQDGRLFD GAYKPDMTNC LEETEMGSDF CSDSSCSSDS SRLGASSGVG  180
FVDGLSMVQE SMKFPVNAAA FQAEGEHSED LELSAFERMK VERQISASLY AMNGVQEYME  240
AVHEASEAIW DLPPLCSLFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.14e-28ERF family protein