PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023518049.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 241aa MW: 27106.8 Da PI: 10.5409 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.6 | 1.9e-12 | 71 | 122 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksL 54 ++ +hn+ Er RR+++Ns + Lr llP+ + +K +s ++ +A +YI +L XP_023518049.1 71 KKLKHNASERDRRKKMNSLYTSLRCLLPST---NRTKtMSNPATISRALKYIPEL 122 5789*************************8...78888**************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MIPSSSTTHG GWIPGNPQST NGRSSELFIQ FSSPQPSHHV KVESCSPPSA GDGHHRGGGG 60 CGGDDPLAVA KKLKHNASER DRRKKMNSLY TSLRCLLPST NRTKTMSNPA TISRALKYIP 120 ELRQHVEELR RRKQGLETKI NAMTHDQQKQ VRKNKEAPWM GCSSCAVNWL RENEALLQLT 180 SNDTFKLKFS QILRSLDEDE LLVKTVSTFQ SFDGRHFFTL LVQAKPNTPS RVLQEILNRK 240 F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56970.1 | 3e-30 | bHLH family protein |