PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023518019.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

MYB_related

Protein Properties

Length: 487aa MW: 55219.6 Da PI: 8.6562

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023518019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.2	5.1e-10	365	412	4	48
S-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 WT E +lvd+++++G+g+W+ I r++ +Rt+ +++++w+++l XP_023518019.1 365 WTLTEVMQLVDGIAEYGTGRWTHIKRHLFahsPHRTPIDLRDKWRNLL 412 ***************************9999*************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MDQEAHFCRK FTNMKSHWDL DQLLGDANQV GEFHAANNLP NTYAEVAENS FRQNRGLHLG 60 NLSSECKSQG SSRSDADAFG ISELSAAMIM EAEYNDTHVE RGFTHDLCAG TNSSRVTPLE 120 GSICDTILDN RNIHKLVNLS SECKSQGSSR SDTDAFGISE LSAAMIMETE FNNTHVERGF 180 THDLCAGLRT NSSRVTPHEG SICDTILDNR SIHKFNTNES FIENRDLSDE NVKGDIVASK 240 LVSCSRERRL RKPTRRFIEE FSDSKSESNK GRKKTPTKDK YMKGTSTEES SHVSHEVQVS 300 TPKSEWHCGT SVPVQSRSQR RHPKKHVPVS GFLSEDVYSA TECKNVYSSA KRCKKHDRRK 360 HQKMWTLTEV MQLVDGIAEY GTGRWTHIKR HLFAHSPHRT PIDLRDKWRN LLRASCVNIQ 420 NRKGIERKQS HASRPLPKSL LQRVYELANI YPYPKERSPK SVEATTPAPD LTESNALPFN 480 WGRKKDE

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MDQEAHFCRK FTNMKSHWDL DQLLGDANQV GEFHAANNLP NTYAEVAENS FRQNRGLHLG  60
NLSSECKSQG SSRSDADAFG ISELSAAMIM EAEYNDTHVE RGFTHDLCAG TNSSRVTPLE  120
GSICDTILDN RNIHKLVNLS SECKSQGSSR SDTDAFGISE LSAAMIMETE FNNTHVERGF  180
THDLCAGLRT NSSRVTPHEG SICDTILDNR SIHKFNTNES FIENRDLSDE NVKGDIVASK  240
LVSCSRERRL RKPTRRFIEE FSDSKSESNK GRKKTPTKDK YMKGTSTEES SHVSHEVQVS  300
TPKSEWHCGT SVPVQSRSQR RHPKKHVPVS GFLSEDVYSA TECKNVYSSA KRCKKHDRRK  360
HQKMWTLTEV MQLVDGIAEY GTGRWTHIKR HLFAHSPHRT PIDLRDKWRN LLRASCVNIQ  420
NRKGIERKQS HASRPLPKSL LQRVYELANI YPYPKERSPK SVEATTPAPD LTESNALPFN  480
WGRKKDE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	253	ERRLRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	4e-22	MYB_related family protein