PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517969.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ZF-HD
Protein Properties Length: 323aa    MW: 36290.5 Da    PI: 8.3362
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.75.9e-33118173359
     ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                     +vrY+eClkNhAas+Ggh++DGCgEfmp  ge+gt++alkCaAC+CHRnFHR+ev++
  XP_023517969.1 118 SVRYRECLKNHAASTGGHVLDGCGEFMPG-GETGTPEALKCAACECHRNFHRKEVKD 173
                     69**************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEMRGEDEEI GTPSPLCYQS NTESSTKLPN SDHTHLTPAD TRRDHTVPQL HFSHQLNQNH  60
HKLSLHQYLH KHTTDHPVAT PDPVQTSVTA SPSADTQPIA SSRSISRTPP ASNNVIPSVR  120
YRECLKNHAA STGGHVLDGC GEFMPGGETG TPEALKCAAC ECHRNFHRKE VKDHEPTQLA  180
VPSGFFISNT IRNNGHRTDR SPVPLSRHHQ LPAVPISSMM AFGGSNGAPD ESSSEDLNMF  240
HQSNNGARDL FGQQQQLMKK RFRTKFTQGQ KDKMEEFAEK LGWRIQKHDE LEVQQFCAEV  300
GVRRQVFKVW MHNNKQAMKK KQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.15e-70ZF-HD family protein