PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517930.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family TCP
Protein Properties Length: 450aa    MW: 48996.9 Da    PI: 7.8262
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP120.12.7e-37832322134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.................ssssaseceaesss 79 
                      g+kdrhsk+ T++g+RdRRvRls+ +a++f+dLqd+LGfd++sk++eWL+++a  ai el+++                               
  XP_023517930.1  83 SGGKDRHSKVWTSKGLRDRRVRLSVGTAIQFYDLQDRLGFDQPSKAVEWLIKAAADAITELPSLntsfpetpkqlsgekisA------------- 164
                     689*************************************************************665555444444432221............. PP

             TCP  80 ssas........nsssg......kaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134
                       ++        +   +       + +++a+s++s++s+ s l+l++      r kar+rarer ++++ +++
  XP_023517930.1 165 --TDqpgpfdlaE---QnqsqlhVSLSKSACSSNSETSKGSGLSLSRsevrVNRLKARERARERAQKEKEKEQ 232
                     ..11122222220...022233344445556666666666666666642336669********6665555443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
MEVVDNIQEQ PRKFPRLANG RSSDSTKIGF KGVENIHPED EEDKESKRVG GSTAGVGRGG  60
ADDDVNQLRG WHHSRIIRVS RASGGKDRHS KVWTSKGLRD RRVRLSVGTA IQFYDLQDRL  120
GFDQPSKAVE WLIKAAADAI TELPSLNTSF PETPKQLSGE KISATDQPGP FDLAEQNQSQ  180
LHVSLSKSAC SSNSETSKGS GLSLSRSEVR VNRLKARERA RERAQKEKEK EQDSSRIADH  240
NLTSMTQNSS FTELLAGCAA TVSAHGDAGV AAERQWQPST VAMDYFSSGI LETSTSRSHH  300
SSGFSEQINL GTSLPQTMSS TPLFNSVSAG DNNTEQLHHF SFVPDGNIVP VVTTHPTGGS  360
DYNLNFTISS NLPGYYRGTL QSNSSLLPHI QRFSPVDGSN LPFFFGAATS AAPPLENHHH  420
YQFSPAFDGR LQLCYGGGNR QSEPKGKGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.13e-75TCP family protein