PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023517820.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 251aa MW: 27898.1 Da PI: 10.2069 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42 | 1.7e-13 | 72 | 118 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+++E+rRRdriN +++Lr+l+Pk+ K++Ka+ L A++ +k+L XP_023517820.1 72 KSHSQAEKRRRDRINAQLATLRKLIPKS-----DKMDKAALLGSAIDQVKDL 118 79*************************8.....7*************99988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MEKNWDFSST KPEGINWAHC NGNSSREPSL LLPFMINPQL SSSTEVQFDG FPSFSTSTEG 60 MVADVRAVSA SKSHSQAEKR RRDRINAQLA TLRKLIPKSD KMDKAALLGS AIDQVKDLKR 120 KAMEVSKNMT VPTDMDELTI DSTMVEDNNK NNIAIKVSVS CDDRPELFAE LIQVIKGLRL 180 TTIRADMASV GGRIKSILVL CNKDGEKNVC LKTVQQSLKL VLSRISSSSA ASTCRIRSKR 240 QRFFLPSHYS K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40200.1 | 2e-46 | bHLH family protein |