PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517747.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family bHLH
Protein Properties Length: 292aa    MW: 32442.1 Da    PI: 7.8396
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.50.000131962331254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ ++++ L++l+ +      +K + +++L++A+ YI+ L
  XP_023517747.1 196 RKEKLGDRISALQRLVAPF-----GKTDTSSVLTEAIGYIQFL 233
                     7778899*********998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MESANLQELF SGYSSLVPAP RPPLLTHECI PNTILDGNSY NNNNNPYLMD QTLQCSREHE  60
NLWFNFSSNY QQQQEQEQPN EQHLSNLYSC VQSPTSYGGF QGLSTGSNTN YYSTTTTTTT  120
TSTLDLLSCS SLQAADPHLG LISSGFNKKR ALFGYVQDSI NNNSSNRVKR PLNSSSLAKK  180
PNAHESKRSC PPLKVRKEKL GDRISALQRL VAPFGKTDTS SVLTEAIGYI QFLHDQVETL  240
SMPYLGSSQS KPYQKLQPGS TQEDGAKPRP DLRSRGLCLM PLSWASFIHG YD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.12e-37bHLH family protein