PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517704.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 245aa    MW: 26678.9 Da    PI: 8.0146
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517704.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.0004494116123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++C + F ++  L  H++ H
  XP_023517704.1  94 FSCNYCRRKFFSSQALGGHQNAH 116
                     89*****************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MQSPKLNLEW EEDSEVSTQV ASDMAVPEAT SNPSKDSSST SCLTNSIKGN TNQGLVSVDL  60
TLHFNPNDVD ANGSGETSSE AVGHVSGSTN PRMFSCNYCR RKFFSSQALG GHQNAHKRER  120
TMAKRAMRMG MFSNRYTSLA SLPLHGSAYR SLGIQAHAAV HHKILPAQRP FIARNGVTFD  180
EGYIGMPFFM EDEDVAPFWP GSFRRVNERS TGSMPGEVSQ VPSPKSGTSM APPKMSCSPD  240
LTLRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66140.11e-40C2H2 family protein