PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517685.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 220aa    MW: 24219.6 Da    PI: 5.4621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.61.2e-1669118255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                      ykG+r +k +g+WvAeIr+p   +kr r++lg++ ++  Aa+a++ a  +l+g
  XP_023517685.1  69 PYKGIRMRK-WGKWVAEIREP---NKRSRIWLGSYSSPVAAARAYDTAVFYLRG 118
                     59*****99.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MPIVPPQSDP PFSFFHEDSD SDSDSDSDSD SDFGLAKGRA QIWDSAAMDG VAEAGREATR  60
KRGVDNQRPY KGIRMRKWGK WVAEIREPNK RSRIWLGSYS SPVAAARAYD TAVFYLRGPS  120
ARLNFPELLA GEGRGISGGC GGDMSAASIR KKATEVGARV DALESSVGDQ QRQRQHRSHV  180
RQASACPAES KGYGGYLDRV DLNKLPDPEE EIEEADRERE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67190.15e-51ERF family protein