PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517635.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C3H
Protein Properties Length: 862aa    MW: 95789.8 Da    PI: 8.8103
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517635.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.73.7e-07283302525
                     --SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaH 25 
                     +C+ffa+ GtC+ G +Ck++H
  XP_023517635.1 283 ICNFFAA-GTCRNGKNCKYSH 302
                     8**9999.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 862 aa     Download sequence    
MSGSGRKRSS KWDLREESRP GWISPELASD DGSKRSGMEI TNTVSKSKKD WGLLSKEPLS  60
ETRDSHKEDY TNKGYNKNME GTAEWDADKS YSTRMSPGLD GWRRHSSNPS DRNDWSRSVR  120
GRSRSRSWSR SRSRSRTPPR SFKRDSGFHD RNRNRTRVST QLCRDFASGR CRRGGGCPFL  180
HAENQNLDDS WDSRNKKGGR SLRSTPHDFR DYSRSGRSAA PCTDFVKGRC HRGESCKYPH  240
DSGFHELSRG SSNDISRDRE NDRSKEAYLS RGEREPSSSS LVICNFFAAG TCRNGKNCKY  300
SHQSQPCASL ERKSSADGWE QVECSDGRER LWDGSKSNEL ASGSDFTQLR EEKNKQIASQ  360
ESRYTWPSEL KGGHGLNNES KIQWDQAASI KAVQNSKNDT ILSKPEDAGG CIGTSDSRGH  420
RKWPSDDMEM SPDWHFPVQP SNHVVKGDCN IILDSGSQTS MALATLSHAI VQEALAKKQD  480
VTIEPLTVDN THFRQNHNLT KDVTMASAFN DKITIDKTIA SHAEGNPSGN IVLGQKMAYH  540
TNHPGGSVLN PNVVDGIFRV KPREDDRSMP GINPVTTITP NMVTSEQITQ LTNLSVSLAQ  600
YFGNVQPLPQ LYASLSTHNV SEIPSFPYSD APVGALGTLM KTSPIIECSK QHDSTVCNSL  660
EVKKLEATKI PSDSLLNFTG QKSMTDAKDE VQIPIFPLSS DPSNKIVISA KETPNESDAI  720
NHGKRAAEGE ANNKKNGDGD NENRTEAGAN EDSEENDTTE NANGNDGVHD KKKGKDTKGI  780
RAFKFALVEF IKELLKPTWK EGHISKDVYK TIVKKVVDKV TGTLQGGHIP QTQEKIDQYL  840
SFSKSKLTKL VQAYVDRVQK TS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.12e-11C3H family protein