PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517613.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GRAS
Protein Properties Length: 600aa    MW: 66717.4 Da    PI: 4.7794
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517613.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.93.4e-1132326002374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++L+ecA+ +s+++ ++a ++  +l+e +s++gdp++R+a+yf+eAL +rl+    ++ + l +se++   s++ + ++k++++++P+ kf+hl
  XP_023517613.1 232 LKTLIECAR-LSESEPNRAAQIFIQLKESSSEHGDPTERVAFYFLEALYRRLSL---QTENRLVCSEST---SDDFTISYKALNDACPYSKFAHL 319
                     689******.566688899999*******************************9...899999***999...99********************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaIle +e+++++HiiDf+isqG+QW+aLlqaLa+R++g+p  +Ri g+ +p  g   +++l +tg+rLa+fA+ l+++fef+  + + +e+
  XP_023517613.1 320 TANQAILEMTENASKIHIIDFGISQGVQWAALLQALATRSSGKPtGIRISGIPAPMLGncPATALFATGNRLAEFAKLLELNFEFDR-ILTPIEE 413
                     ****************************************887769********9999999**************************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++r++++E+laVn++lql++llde+  +     +vL+l ksl+P++v++ e ea++n+  F++rf +a++yysa+f+sl+ klpr+s+er 
  XP_023517613.1 414 LKESSFRIDSDETLAVNFMLQLYNLLDETPRVVL---NVLRLAKSLNPRIVTLGEYEANLNRVGFFNRFKNAVRYYSAVFESLDPKLPRNSNERL 505
                     ***************************9999999...9********************************************************* PP

            GRAS 284 kvErellgreivnvvacegae..rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                      +E+ +lgr+i ++v  e +   ++er+e +e+W++++ ++GF++v+ls++a +qa+ ll k++ s +y++ e+s  ++ l W++ p+++vS+Wr
  XP_023517613.1 506 QLEKLVLGRQIGDIVGPESSPgaKIERMEDKEQWKMMMVNCGFEAVNLSHYAKSQAQILLWKYDySCEYSLIESSPGFLsLAWNQVPIITVSSWR 600
                     ****************99886669****************************************9999*99999888888**************8 PP

Sequence ? help Back to Top
Protein Sequence    Length: 600 aa     Download sequence    
MFVTRDFLSG WRMANMCADS GNLMAIAQQV MKQKQQQEQQ QQQPPQQPPP QQLTSPSTFT  60
LNPWSGSNHG LSSPDLGFGL AGAGFSDPFQ VQRVVDGGET SFQFPNLEHH SSSFRYPDFD  120
SDEWMDSLMA GGDSTDSSNL PSGCDAWQAN SDIALYGDDP FVPCPSRLTI PCSSPSDLNR  180
VIFPEPPRNQ AAIQPPVVSW TGLTAKTPPV VVKDTNGCSS SSAENEPKPP LLKTLIECAR  240
LSESEPNRAA QIFIQLKESS SEHGDPTERV AFYFLEALYR RLSLQTENRL VCSESTSDDF  300
TISYKALNDA CPYSKFAHLT ANQAILEMTE NASKIHIIDF GISQGVQWAA LLQALATRSS  360
GKPTGIRISG IPAPMLGNCP ATALFATGNR LAEFAKLLEL NFEFDRILTP IEELKESSFR  420
IDSDETLAVN FMLQLYNLLD ETPRVVLNVL RLAKSLNPRI VTLGEYEANL NRVGFFNRFK  480
NAVRYYSAVF ESLDPKLPRN SNERLQLEKL VLGRQIGDIV GPESSPGAKI ERMEDKEQWK  540
MMMVNCGFEA VNLSHYAKSQ AQILLWKYDY SCEYSLIESS PGFLSLAWNQ VPIITVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein