PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023517382.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | AP2 | ||||||||
Protein Properties | Length: 339aa MW: 37194.1 Da PI: 8.8518 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.2 | 3.7e-17 | 136 | 185 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_023517382.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185 78*******************......55************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MLNLNDLIIN CDETSTKRTV MEDSETSNSS VVNADEVCNS RDEDSSVLIF NILKRENSGG 60 GGGGASPELV TQTLFPVAGG WGETGSPVPK SHWLNLSSTG DFGGEGVGGG TAELKIVQQK 120 QQQVRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA 180 IKFRGVNADI NFNISDYDED MKQLKNLSKE EFVHVLRRQS TGFSRGGSKL RGLSLQKYGR 240 WETQTSPIMT KNEIEERSTM VDANNGGNGH NLDLSIGGIF NYHLRNSSQN LNIQTPKKES 300 NGGGGYGVGG QQPHIPPSMW SGFCSGFLAD NQTNKNQTR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.2 | 1e-56 | AP2 family protein |