PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023517380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 33031.8 Da PI: 7.1801 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.4 | 2.1e-10 | 24 | 70 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT+eE +++ +a +++ + +W ++a++++ g+t +++ ++q + XP_023517380.1 24 QWTPEENKRFENALALYDEDtsdRWLKVAAMIP-GKTIGDVVKHYQEL 70 6********************************.***********975 PP | |||||||
2 | Myb_DNA-binding | 46.7 | 7.6e-15 | 133 | 177 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + k++G+g+W+ I+r + ++Rt+ q+ s+ qky XP_023517380.1 133 PWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKY 177 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MEFLSPASYL RNSNWLFQET KETQWTPEEN KRFENALALY DEDTSDRWLK VAAMIPGKTI 60 GDVVKHYQEL EEDVCDIEAG LIPIRGYDNR HSFTLERVDS SHGFDGLSHF YGAGFKTGTS 120 TTPSDHERKK GIPWTEEEHR QFLMGLKKYG KGDWRNISRN FVTTRTPTQV ASHAQKYFIR 180 QLTGGKDKRR SSIHDITTVN LPDMKSPSGD SNRPPSMATQ LHQLSKMVGR AEQPLDWKRS 240 NQGMARVLES TTTTTTNGNM LDAAQLLDHN TNHGSAIAPY YTIFEMPHYG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38090.1 | 1e-107 | MYB family protein |