PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517343.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 384aa MW: 43420.7 Da PI: 6.5117

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517343.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	101.7	4.8e-32	219	273	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt++LHe+Fv++v++LGG+ekAtPk+il+lm+ +gLt+ hvkSHLQkYR+ XP_023517343.1 219 KTRIRWTQDLHEKFVDCVNRLGGAEKATPKAILKLMDSEGLTIFHVKSHLQKYRI 273 68****************************************************7 PP
2	Myb_DNA-binding	50.2	6e-16	223	272	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rWT++++e++vd+v++lGg t+k+I + m +g+t ++ks++qky+ XP_023517343.1 223 RWTQDLHEKFVDCVNRLGGAekaTPKAILKLMDsEGLTIFHVKSHLQKYR 272 9***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MNDFGIDSMQ EIQQNHGMVA DCFQNFRAQQ PWRMGTCVPL PAMEEVESLE QQDFGSSKSS 60 STIINLFESP ASAFFATEQC MGIPPIEFRT GSSSFDRASD SISAIFQSSG ENLSLDLTEK 120 SGADSEFRNT LQSVVKSQLC KRRFDGFPKS FSSDHKVFDD CSHSIEKHYS VPFKDQGECY 180 NPSFCSSQEK ISPRFSGLGA SVGYGSSSSS FNGNGFTTKT RIRWTQDLHE KFVDCVNRLG 240 GAEKATPKAI LKLMDSEGLT IFHVKSHLQK YRIAKYMPES AERKSDRRNS MIEVAQLDMK 300 TALQIKDALQ LQLDVQRRLH DQLEIQRKLQ LQIEEQGKQL KMMFDQQQET NKCFFRTNGF 360 NNSDDPPFPT PESIRNAQFP SKIS

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MNDFGIDSMQ EIQQNHGMVA DCFQNFRAQQ PWRMGTCVPL PAMEEVESLE QQDFGSSKSS  60
STIINLFESP ASAFFATEQC MGIPPIEFRT GSSSFDRASD SISAIFQSSG ENLSLDLTEK  120
SGADSEFRNT LQSVVKSQLC KRRFDGFPKS FSSDHKVFDD CSHSIEKHYS VPFKDQGECY  180
NPSFCSSQEK ISPRFSGLGA SVGYGSSSSS FNGNGFTTKT RIRWTQDLHE KFVDCVNRLG  240
GAEKATPKAI LKLMDSEGLT IFHVKSHLQK YRIAKYMPES AERKSDRRNS MIEVAQLDMK  300
TALQIKDALQ LQLDVQRRLH DQLEIQRKLQ LQIEEQGKQL KMMFDQQQET NKCFFRTNGF  360
NNSDDPPFPT PESIRNAQFP SKIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06800.1	3e-69	G2-like family protein