PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023517309.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | G2-like | ||||||||
Protein Properties | Length: 299aa MW: 32203.3 Da PI: 6.8733 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 96.7 | 1.7e-30 | 97 | 150 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl XP_023517309.1 97 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 150 59*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 99 | 149 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r+ WT+++++++vdav+ lG + +ktI++ m g+t++++ s++qky+ XP_023517309.1 99 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 149 789*******************9***************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MREEHSNWFS RWEEELPSPD ELMPLSQTLI TPDLALAFDI QNPTNCSPPL PCPSPPLSNP 60 LPGSGNGIPL PNSGDFGDSA DLGSGAGSDE PARTLKRPRL VWTPQLHKRF VDAVAHLGIK 120 NAVPKTIMQL MSVDGLTREN VASHLQKYRL YLKRMQGLSS GGGGAAAAGL VASSDPATDH 180 LCASSPVPPH LLHSARASSD HFMPFVPMAT LQQHHHHLQQ MAAASVVAHP QLQPPYHRGQ 240 FGSPSNGQFE HPFLGRQSQP IHRMGAPVHN SVPNYIEDLE SGNASGGRKV LTLFPTGDD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10760.1 | 1e-88 | G2-like family protein |