PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517236.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family ERF
Protein Properties Length: 336aa    MW: 36738.1 Da    PI: 5.2085
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.87.4e-20150198355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+G+r+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  XP_023517236.1 150 YRGIRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEEAALAYDKAAYKLRG 198
                     9******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MAAALDFCTG ISAPVYSSDP FCEELMKALQ PFMKSAVSSS SSSSSSSVSY QPNVNPDFCS  60
PSSIRLFPQA CSGIEQMGLE QSGPIGLNNP TPSQVLQIQA QIQLPSQTLS SFPSSFSFQS  120
RVSSQYHSVL APKSIPMKYT GSPTKPTRIY RGIRQRHWGK WVAEIRLPKN RTRLWLGTFD  180
TAEEAALAYD KAAYKLRGDL ARLNFPHLKH KFGDFEPLHS SVDAKLQAIC QSLKQGETEK  240
PPSAPPPSES NSVVNNFKEA ELKIEAETSS SSSSSWSSPS LCEDFSTGSS PESSISFLDF  300
SDSQWGEGEA FCLEKYPSVE IDWAALNQLG ESECLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39780.12e-59ERF family protein