PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023517222.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family AP2
Protein Properties Length: 418aa    MW: 45642.6 Da    PI: 9.0988
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023517222.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.85e-17136185155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_023517222.1 136 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 185
                     78*******************......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 418 aa     Download sequence    
MLNLNDLIIN CDETSTKRTV MEDSETSNSS VVNADEVCNS RDEDSSVLIF NILKRENSGG  60
GGGGASPELV TQTLFPVAGG WGETGSPVPK SHWLNLSSTG DFGGEGVGGG TAELKIVQQK  120
QQQVRKSRRG PRSRSSQYRG VTFYRRTGRW ESHIWDCGKQ VYLGGFDTAH AAARAYDRAA  180
IKFRGVNADI NFNISDYDED MKQLKNLSKE EFVHVLRRQS TGFSRGGSKL RGLSLQKYGR  240
WETQTSPIMT KNEIEERSTM VDANNGGNGH NLDLSIGGIF NYHLRNSSQN LNIQTPKKES  300
NGGGGYGVGG QQPHIPPSMW SGFCSGFLAD NQERRERRSY PSKTVTSSGW PMAMPISMPM  360
SVRENGSNGI RAREEAHVSK SAASSGFSSS SNFGSLYPQN TPPLHNTLCL PTPSPNIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.23e-56AP2 family protein