PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517159.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WOX

Protein Properties

Length: 384aa MW: 41612.7 Da PI: 7.3264

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517159.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.5	1e-17	58	117	2	56
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 ++R+++++eq+++Le+ F++ +p ++e++++ ++l ++ +++V++WFqNr+ + k XP_023517159.1 58 KPRWNPKPEQIRILEAIFNSgMVNPPRDEIRKIRAQLqeygQVGDANVFYWFQNRKSRSK 117 89***************99***********************************98 PP
2	Wus_type_Homeobox	111.3	5.1e-36	57	119	2	64
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +++RW+P+peQi+iLe++++sG+++P+++ei++i+a+L+eyG+++d+NVfyWFQNrk+R++ k XP_023517159.1 57 PKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKSK 119 689**********************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MASSNRHWPS MFKSKPCNSH HQWQHDINPN LSSSTATCLR SAPYATVGGC EERSPEPKPR 60 WNPKPEQIRI LEAIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKSKL 120 RHIQNSKSNN NHNSQTTTAP LPSPMPPIAT ATITAATTCS SSSSSDKSSP ISAPIKTFSS 180 NSMTQNYLPQ LTNELLPEPF FFPASQTGGG GSGGSSNLSQ GFCLSELCSV VQQVPEDGVV 240 GPCTSLLLSE IMNPTEASKK DLDEDKITVK LPPPFMNYHP VFTPSTDNIL PPTTISTALT 300 TLPPPSHTIH QGVGEVYGLG QSCVGKSTVF INGVAFEVGS GAFNVREAFG DEAVLLHSSG 360 QPVLTNEWGL TLHSLQHGAS YYLI

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MASSNRHWPS MFKSKPCNSH HQWQHDINPN LSSSTATCLR SAPYATVGGC EERSPEPKPR  60
WNPKPEQIRI LEAIFNSGMV NPPRDEIRKI RAQLQEYGQV GDANVFYWFQ NRKSRSKSKL  120
RHIQNSKSNN NHNSQTTTAP LPSPMPPIAT ATITAATTCS SSSSSDKSSP ISAPIKTFSS  180
NSMTQNYLPQ LTNELLPEPF FFPASQTGGG GSGGSSNLSQ GFCLSELCSV VQQVPEDGVV  240
GPCTSLLLSE IMNPTEASKK DLDEDKITVK LPPPFMNYHP VFTPSTDNIL PPTTISTALT  300
TLPPPSHTIH QGVGEVYGLG QSCVGKSTVF INGVAFEVGS GAFNVREAFG DEAVLLHSSG  360
QPVLTNEWGL TLHSLQHGAS YYLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33880.1	6e-61	WOX family protein