PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023517155.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 204aa MW: 22566.3 Da PI: 10.002

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023517155.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116	1.6e-36	30	87	4	61
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 + lkcprC+s+ntkfCy+nnyslsqPr+fCk+CrryWt+GGalr vPvGgg r+n ++ XP_023517155.1 30 ARLKCPRCESRNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGYRRNASK 87 5789**************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MPFPSNFEEQ TVSPPPALPQ GRPESMTDPA RLKCPRCESR NTKFCYFNNY SLSQPRHFCK 60 TCRRYWTRGG ALRSVPVGGG YRRNASKSPV NSPCQSSTTA AAGEGMRLNY NAISTQNEGV 120 KGSSYPIGMA NFLGLDQHQW RPQQLQLHQL QPARLLGNNV VEASSSYNMV GQQKVKEGKP 180 LWGVVAGSDR HCWTAFNPSS SSHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G55370.1	5e-34	Dof family protein