PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023516898.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

CPP

Protein Properties

Length: 591aa MW: 63959 Da PI: 7.5417

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023516898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	44.2	3.8e-14	118	157	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 ++k+CnCk+s+Clk+YCeCfa+g +C+ C+C++C N+ e+ XP_023516898.1 118 KQKQCNCKHSRCLKLYCECFASGIYCDG-CNCTNCYNNVEN 157 89************************.******9875 PP
2	TCR	50.9	3.1e-16	202	241	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e XP_023516898.1 202 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 241 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MGEVGNRETD NLPPPNAQTN SAEVVSSDVP AKKLARQLNF TGLGGAVLPD HPHFHPQPRS 60 QSDSPVLMVV QSQSQPKSPQ HLMVSPIGTQ APHPVRKPDS PKSRLRSNVE TKDATPKKQK 120 QCNCKHSRCL KLYCECFASG IYCDGCNCTN CYNNVENEAF RREAVETTLE RNPNAFRPKI 180 ASSPHGTREI RDEVGEVVML GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF 240 EGSEERQALF HGDHVSNMAY IQQAANAAIT GAIGSSGYAY LPTSKKRKVP ELCFASVGKD 300 PPLNSIPQFH QVNNLMSSGT STSSPLPVAH AGSPAAPGTS KFSFRSLLAD LVQPHDLKEL 360 CSVLVVLSSE VAKNIAEKRI AEEQINDTLQ ISRASSAGDG SQHQKADEKA ADGGCGSLNQ 420 SERLVHDNHS DSSDMTKSRP MSPGTLALMC DERDTMFMGA APADRLAGHG CSTSSHVPDK 480 SVSEVYIEQE RIVLTKFRDC LNKLITLGEI KETNFTSRSE ERNENPSNNV TTNSGCEQGT 540 IDNGVVKSVA LSAPIIPQVG TSAGRPSNDL LPRILPLPEN GKSKPEVGRE V

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MGEVGNRETD NLPPPNAQTN SAEVVSSDVP AKKLARQLNF TGLGGAVLPD HPHFHPQPRS  60
QSDSPVLMVV QSQSQPKSPQ HLMVSPIGTQ APHPVRKPDS PKSRLRSNVE TKDATPKKQK  120
QCNCKHSRCL KLYCECFASG IYCDGCNCTN CYNNVENEAF RREAVETTLE RNPNAFRPKI  180
ASSPHGTREI RDEVGEVVML GKHNKGCHCK KSGCLKKYCE CFQANILCSE NCKCMDCKNF  240
EGSEERQALF HGDHVSNMAY IQQAANAAIT GAIGSSGYAY LPTSKKRKVP ELCFASVGKD  300
PPLNSIPQFH QVNNLMSSGT STSSPLPVAH AGSPAAPGTS KFSFRSLLAD LVQPHDLKEL  360
CSVLVVLSSE VAKNIAEKRI AEEQINDTLQ ISRASSAGDG SQHQKADEKA ADGGCGSLNQ  420
SERLVHDNHS DSSDMTKSRP MSPGTLALMC DERDTMFMGA APADRLAGHG CSTSSHVPDK  480
SVSEVYIEQE RIVLTKFRDC LNKLITLGEI KETNFTSRSE ERNENPSNNV TTNSGCEQGT  540
IDNGVVKSVA LSAPIIPQVG TSAGRPSNDL LPRILPLPEN GKSKPEVGRE V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-167	CPP family protein