PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516878.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C2H2
Protein Properties Length: 299aa    MW: 34406.4 Da    PI: 6.4025
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516878.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00064157181123
                     EEETTTTEEESSHHHHHHHHHH..T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt..H 23 
                     + C  C+k ++  ++++ H+++  H
  XP_023516878.1 157 FYCDLCNKQYKLAMEFEAHLSSydH 181
                     78*****************987555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDKRSYSSRL ETNNPNKAYA KEQDSLGDDF IDDFRLPINH RPTENVDLDN VEQASLDTQL  60
TSSNVGYRLL QKMGWKGKGL GKDEQGIIEP IKSGIRDPKL GIGKQEEDDF FTAEENIQRK  120
KLDVEMEETE ADVKKREVLA EREEKIQTEV KEIRKVFYCD LCNKQYKLAM EFEAHLSSYD  180
HNHRKRFKEM REMHGSSSRD DRNKREQQRE EREMAKFAQI ADARKKEQQM LEQQERSAKA  240
PASTEIRNAT SLADQDQRKT LKFGFSSKGG TSKIFGGATK KPKVVAPVAS VFGNDSDEE