PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516795.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family TCP
Protein Properties Length: 311aa    MW: 35921.3 Da    PI: 9.1919
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516795.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1165e-36862312135
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..........ssssasec.eaesssssas.. 83 
                       k+drhski T +g+RdRR+Rls+++a++fF Lqd+LG+dk+skt+eWLl qa ++ik+l             +      + ++++ +s  +  
  XP_023516795.1  86 SSKRDRHSKIDTLRGPRDRRMRLSLPVAREFFGLQDMLGVDKASKTVEWLLFQARHEIKKLSCHdrggngdmrsP------SiSDGEVVSGIDet 174
                     579***********************************************************9977765543321......22333333333322 PP

             TCP  84 .nsssg........kaaksaakskksqksaasalnlakesrakarararertrekmriknk 135
                          +        ++a++++k+ +  +++ +   lake r+kararar rt ek+ ++ k
  XP_023516795.1 175 iV---NskidmkesRKANKKEKRGRVVRKT-TYYPLAKECREKARARARARTIEKQLQSGK 231
                     20...1444455434444444444444444.589*********************988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MFLFNANDSI SFPDHSFLHF PSPFHDDPTL HQNDTLLHQI LLNEPPANFV SDFGSESTRI  60
IVDDEHHHRV HQSLIMEQPI QRKQASSKRD RHSKIDTLRG PRDRRMRLSL PVAREFFGLQ  120
DMLGVDKASK TVEWLLFQAR HEIKKLSCHD RGGNGDMRSP SISDGEVVSG IDETIVNSKI  180
DMKESRKANK KEKRGRVVRK TTYYPLAKEC REKARARARA RTIEKQLQSG KKTLSSDQTN  240
TNKQIEGRIQ DVIRTSSSWS TQIDDQQLRT RNDETDDGLM MMGRWSQEHP FGDFQFFGKP  300
WEPDNNHGIC S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.27e-25TCP family protein