PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023516672.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

TCP

Protein Properties

Length: 313aa MW: 34853.9 Da PI: 9.7878

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023516672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	85.5	1.3e-26	46	138	3	66
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.............................s 66 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+L + ++sk i+WLl k i++l+ + s XP_023516672.1 46 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDKLPPLqiptgfspfhqqmlfppydhhhhyyssssS 138 79*************************************************************666655544444444433222222221111 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MLRNSKEKGF ESKEEGKYRF PKAPTSSRQW SGFRNPRIVR VSRSFGGKDR HSKVCTIRGL 60 RDRRIRLSVP TAIQLYDLQD KLKLGQPSKV IDWLLDVTKL DIDKLPPLQI PTGFSPFHQQ 120 MLFPPYDHHH HYYSSSSSSS SSQFCNSLPL PFAVDVKGDS TAIEKTKIWD MDLALQGKAS 180 SLTKGKWVDG SSNQHVEDYN FTPYNTYNSS QFGNNNGVFP SQIEAPTSSS SASALFFTPY 240 ASYITNPFES HIHFLSSNPH ALSNPFVPSA LHPFASQNLK PFSAASFNFK QLLHAADGNG 300 ADRSNKDGAA GDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	6e-47	TCP family protein