PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023516469.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family HSF
Protein Properties Length: 283aa    MW: 32230.7 Da    PI: 6.5133
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023516469.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind103.32.1e-32131042102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     F+ k+y++++d+ +++ i+w + +nsfvvld+ +f++++Lp +Fkh+nf+SF+RQLn+YgF+kv+ ++         weF++++F +g+ +ll++
  XP_023516469.1  13 FILKTYQMVNDPLTDTSITWGSANNSFVVLDPLHFSHTLLPAFFKHNNFSSFIRQLNTYGFRKVDPDR---------WEFANEWFLRGQYHLLRN 98 
                     9****************************************************************999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i r+k+
  XP_023516469.1  99 IVRRKH 104
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MEVNCGNDIV APFILKTYQM VNDPLTDTSI TWGSANNSFV VLDPLHFSHT LLPAFFKHNN  60
FSSFIRQLNT YGFRKVDPDR WEFANEWFLR GQYHLLRNIV RRKHCSNSAV KLVGVGGDMS  120
DEDLVSEIGR LRKEQRALEH QLQAMKKRLE TTEKRPHQMM AFLHKVVEDP EILPRIMLHR  180
DPTHRFQIPD KKRRFMTSPS SSSPSTASFD TDEIEDDPTR PEVSGPWFLE DPAAFGVPAV  240
APMDIGISSS GGEMKYLTEM TVGAVEESRP PPPYPFSLFG CGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.14e-84HSF family protein