PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023516240.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

E2F/DP

Protein Properties

Length: 381aa MW: 43258.4 Da PI: 10.1787

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023516240.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	71.7	8e-23	16	81	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+ + + ++l+++a++L v +rRRiYDi+NVLe+++++ +k+kn+++w+g XP_023516240.1 16 RKQKSLGLLCSNFLRLYDRGDVHSISLDNAASRL---GV--ERRRIYDIVNVLESVGILCRKAKNQYSWIG 81 79**************9999********.....****************************98 PP
2	E2F_TDP	72.1	6.3e-23	148	228	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ +s++ ++l+e+ak L+ + ++ k RR+YDi+NVL a++liek ++k+++rw g XP_023516240.1 148 RREKSLALLTQNFVKLFVCSNAHLISLDEAAKLLLGDaqsesVMRSKIRRLYDIANVLAAIHLIEKtqtvdTRKPAFRWLG 228 689***********************************998999********************99*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MANLLLSDSS SKAYSRKQKS LGLLCSNFLR LYDRGDVHSI SLDNAASRLG VERRRIYDIV 60 NVLESVGILC RKAKNQYSWI GFSGIPKALR QLKEEDMKGN SFAIAAYDHS RLIDEDETCS 120 DLTSVSQESI PMMSKSSASV RCVASENRRE KSLALLTQNF VKLFVCSNAH LISLDEAAKL 180 LLGDAQSESV MRSKIRRLYD IANVLAAIHL IEKTQTVDTR KPAFRWLGFR GKVENCRAGK 240 PIPCGSKKRT FGTDITNINL KRNKVVNSFD LNKSPNSQKH MHVHLEGCRV EVDLNQSGKF 300 ERHPNSKSFI FGPFSPIARL EVRASKNDVK RFRHNWVSLA STYHPQYQNQ ALRELFSHYK 360 DAWKLWYSET VNRSSIQIPE A

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MANLLLSDSS SKAYSRKQKS LGLLCSNFLR LYDRGDVHSI SLDNAASRLG VERRRIYDIV  60
NVLESVGILC RKAKNQYSWI GFSGIPKALR QLKEEDMKGN SFAIAAYDHS RLIDEDETCS  120
DLTSVSQESI PMMSKSSASV RCVASENRRE KSLALLTQNF VKLFVCSNAH LISLDEAAKL  180
LLGDAQSESV MRSKIRRLYD IANVLAAIHL IEKTQTVDTR KPAFRWLGFR GKVENCRAGK  240
PIPCGSKKRT FGTDITNINL KRNKVVNSFD LNKSPNSQKH MHVHLEGCRV EVDLNQSGKF  300
ERHPNSKSFI FGPFSPIARL EVRASKNDVK RFRHNWVSLA STYHPQYQNQ ALRELFSHYK  360
DAWKLWYSET VNRSSIQIPE A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-111	E2F/DP family protein