PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023516214.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | HRT-like | ||||||||
Protein Properties | Length: 479aa MW: 53540.9 Da PI: 9.9445 | ||||||||
Description | HRT-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HRT-like | 50.2 | 4.2e-16 | 268 | 297 | 2 | 31 |
HRT-like 2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 CGv ++ G vC+++Pv+gRKRC+eHKGm++ XP_023516214.1 268 CGVVIGYGVVCRKPPVEGRKRCAEHKGMKV 297 ****************************97 PP | |||||||
2 | HRT-like | 63.7 | 2.6e-20 | 342 | 372 | 1 | 31 |
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv l dGs+C+r+Pv+gRKRCeeHKG+Ri XP_023516214.1 342 ICGVVLYDGSPCRRTPVQGRKRCEEHKGQRI 372 8*****************************7 PP | |||||||
3 | HRT-like | 53.4 | 4.4e-17 | 431 | 460 | 2 | 31 |
HRT-like 2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 CGv l++G C+rqPvkgR RC eHKGmRi XP_023516214.1 431 CGVDLGNGLYCTRQPVKGRVRCGEHKGMRI 460 *****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 479 aa Download sequence |
MVAEFSSTRL KREDCKRTKH DSSFSKWEIL VAPSDWEDYS SGKEGAERYR IHNLPKVSGP 60 GLYELGLAVS SSGLGREIAK LDADWIVVVY LGEADNVRTR LQHYGRSGSH LGNGYLCFVD 120 CKVVPLEKGP GLFQEMFTRG YSIVYRWAPM KNKRDAQMTE AQLLKTFDYA WNTSGNGARR 180 HNDVLKKLED IASQTKKFTI IARKLLPFRQ KQMGIKIKTS KPIPTENKPG EYGEERSSFF 240 SRILHFSRSR PRLVVNTDDV SGADSNSCGV VIGYGVVCRK PPVEGRKRCA EHKGMKVNGL 300 LKNSSTIYGD TDFSGSNAET SYNTEELSVQ DSFPNKGNFL PICGVVLYDG SPCRRTPVQG 360 RKRCEEHKGQ RIRRSTLISS QEAKPKVDLP SQDNLASLKY KQQTSPTSTQ ESILIAQDNS 420 PDLNSSLERK CGVDLGNGLY CTRQPVKGRV RCGEHKGMRI KGLISRLATV SDAISVRKH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56780.1 | 1e-113 | HRT-like family protein |