PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023516140.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GRF

Protein Properties

Length: 330aa MW: 37435.9 Da PI: 9.2914

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023516140.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.8	1.1e-24	76	119	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk+++ XP_023516140.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 119 79***************************************986 PP
2	QLQ	57.6	3.8e-20	8	43	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l++Ky+++++P+Pp+Ll+ i++ XP_023516140.1 8 PFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKR 43 8*******************************9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MSARSMFPFT SAQWQELENQ ALVFKYMVSG VPIPPDLLFS IKRSTLESPF TSKLFPHHSQ 60 QVGWNCLQMS LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVDV 120 LKTTATNELN HLSNQAFSSL NKNSSLHSYR PFPAPQMSSN PNGNGISTKD TNTLLLLDPG 180 SYSDRSPDYR YTYGLKEEVD EHVFFSQEPS EATARADFSA SSTVDSLQLT PLTMSCSSLY 240 PKQNNFSSLQ SGQSCYPLHQ SLTDPLKQQK REESQKKVHR FFDEWPQKEG GSWLDFNDKS 300 SNIGSVSTTR LSISIPTASN ELPIFRSKNP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-56	GRF family protein