PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023516104.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Dof

Protein Properties

Length: 318aa MW: 34413.9 Da PI: 8.2941

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023516104.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124	4.9e-39	31	92	2	63
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 +++alkcprCds ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+sss XP_023516104.1 31 NHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSSS 92 57899*****************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence
MQDIHSIAGG SRLFGGGGDR RLRPHLHHHQ NHQALKCPRC DSLNTKFCYY NNYNLSQPRH 60 FCKSCRRYWT KGGVLRNVPV GGGCRKTKRS SSSKSKSSPD VAATSPPPPP PPPLRERKST 120 SHSSSESSSL TATTTTAAAA ATEAVSAPSS ISTSALLSVQ DRKLFPAPTT NPNFDGAATD 180 CGIFSEIGNF TSLITSTNET LAFGFGNMGD VTPFAMNHPF QNQAANQWPS QRMMNGNDEV 240 KMQEITGGGG GYMDQTAQVD PSTGLQNSRS SNIGFGPLDW QSNGDHQALF DLPNAVDQAY 300 WSQNQWSSDQ DQPNLYLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60850.1	2e-33	Dof family protein