PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023515858.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

GeBP

Protein Properties

Length: 390aa MW: 43599.5 Da PI: 4.5995

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023515858.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	118.2	4.6e-37	110	208	1	97
DUF573 1 klfqrlwseeDeivlLqGlidfkaktgk.spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 klfqrlw++eDei lLqG++d+++++g+ + ++ d+ fy+++k++++++++k+qlveK+rrLKkK+++ k++sgke++f+++hdq +fe+s+ XP_023515858.1 110 KLFQRLWTDEDEIELLQGFLDYTMQRGTtHHHQnDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVIGKISSGKEFNFKSPHDQATFEISR 204 579***********************633446********************************************************* PP DUF573 94 kiWg 97 kiW XP_023515858.1 205 KIWS 208 *6 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MDPRNDAVFP DEDLEDDEES LEDDDDDEEE ELNDDPSPST SSAGAVAVPS VSAVVTVATP 60 GTIDRPVPVI PPPSIVSISS SDLIRQRLET ASAEPLTLQC EKKPLDESRK LFQRLWTDED 120 EIELLQGFLD YTMQRGTTHH HQNDTALFYD QIKSKLQLDF NKNQLVEKLR RLKKKYRNVI 180 GKISSGKEFN FKSPHDQATF EISRKIWSNT GRIGVDDNAL DDEEPAPTPY ASYMDARNEE 240 MMANFSEKKP TPIPKSRKRS RPGSGLRMDG PPRSSNENLN KEKNSTYNNN NENVNHVGVG 300 GLIEETVRSC LSPLFKELLS NSMGGGGLCG SRGFSGLALH PIPLSFGGGD MADERWRKQQ 360 IMELEVYSKR LELVQEQIKT ALEDLRSMGG

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MDPRNDAVFP DEDLEDDEES LEDDDDDEEE ELNDDPSPST SSAGAVAVPS VSAVVTVATP  60
GTIDRPVPVI PPPSIVSISS SDLIRQRLET ASAEPLTLQC EKKPLDESRK LFQRLWTDED  120
EIELLQGFLD YTMQRGTTHH HQNDTALFYD QIKSKLQLDF NKNQLVEKLR RLKKKYRNVI  180
GKISSGKEFN FKSPHDQATF EISRKIWSNT GRIGVDDNAL DDEEPAPTPY ASYMDARNEE  240
MMANFSEKKP TPIPKSRKRS RPGSGLRMDG PPRSSNENLN KEKNSTYNNN NENVNHVGVG  300
GLIEETVRSC LSPLFKELLS NSMGGGGLCG SRGFSGLALH PIPLSFGGGD MADERWRKQQ  360
IMELEVYSKR LELVQEQIKT ALEDLRSMGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	9e-78	GeBP family protein