PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023515672.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 415aa MW: 44671 Da PI: 9.405

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023515672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.7	3.1e-30	132	191	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCtsa +Cpv+k+v+ s +d +++++tYeg+Hnh+ XP_023515672.1 132 MNDGCQWRKYGQKTAKGNPCPRAYYRCTSApSCPVRKQVQMSVDDISILITTYEGTHNHP 191 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence
MKRTKAEMRE VREENERLKK RLDETMKNYE TLKRQLQLHE MGQLREPKKS TQTTAIAIRN 60 HEVEEMDQVV SLTLGRRLFN NISSPTKSDP QNVGFLGLPA PPTGEDELSR HNPPKKPRVS 120 VRARCDAPLV QMNDGCQWRK YGQKTAKGNP CPRAYYRCTS APSCPVRKQV QMSVDDISIL 180 ITTYEGTHNH PLPVSAMAMA STTSAAASML LSGPSSFATA AANLHGLNSY LSNNTNSKGF 240 YLPNSSTLSS SLNHPTITLD LTSNSPSTNY LPKFPLDFGS SQYSFMPWNN SNSGYGYGNA 300 NQAGHQQFSK SSTPPPPLSS PLPDTIAAAT KAITSDPNFH SALAAALSSI IGGGNGSKTA 360 PPMASYVEEP QGNVCASSSL SSQQGSMGFE AAKSLSCSTS KSPSSSPGDS RENGK

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence

MKRTKAEMRE VREENERLKK RLDETMKNYE TLKRQLQLHE MGQLREPKKS TQTTAIAIRN  60
HEVEEMDQVV SLTLGRRLFN NISSPTKSDP QNVGFLGLPA PPTGEDELSR HNPPKKPRVS  120
VRARCDAPLV QMNDGCQWRK YGQKTAKGNP CPRAYYRCTS APSCPVRKQV QMSVDDISIL  180
ITTYEGTHNH PLPVSAMAMA STTSAAASML LSGPSSFATA AANLHGLNSY LSNNTNSKGF  240
YLPNSSTLSS SLNHPTITLD LTSNSPSTNY LPKFPLDFGS SQYSFMPWNN SNSGYGYGNA  300
NQAGHQQFSK SSTPPPPLSS PLPDTIAAAT KAITSDPNFH SALAAALSSI IGGGNGSKTA  360
PPMASYVEEP QGNVCASSSL SSQQGSMGFE AAKSLSCSTS KSPSSSPGDS RENGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	7e-48	WRKY family protein