PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023515671.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 441aa MW: 47611.4 Da PI: 9.147

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023515671.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.6	3.4e-30	158	217	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCtsa +Cpv+k+v+ s +d +++++tYeg+Hnh+ XP_023515671.1 158 MNDGCQWRKYGQKTAKGNPCPRAYYRCTSApSCPVRKQVQMSVDDISILITTYEGTHNHP 217 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 441 aa Download sequence
MSLTLCSSLL PMTQPLSRAM TLWSTDEERM KRTKAEMREV REENERLKKR LDETMKNYET 60 LKRQLQLHEM GQLREPKKST QTTAIAIRNH EVEEMDQVVS LTLGRRLFNN ISSPTKSDPQ 120 NVGFLGLPAP PTGEDELSRH NPPKKPRVSV RARCDAPMND GCQWRKYGQK TAKGNPCPRA 180 YYRCTSAPSC PVRKQVQMSV DDISILITTY EGTHNHPLPV SAMAMASTTS AAASMLLSGP 240 SSFATAAANL HGLNSYLSNN TNSKGFYLPN SSTLSSSLNH PTITLDLTSN SPSTNYLPKF 300 PLDFGSSQYS FMPWNNSNSG YGYGNANQAG HQQFSKSSTP PPPLSSPLPD TIAAATKAIT 360 SDPNFHSALA AALSSIIGGG NGSKTAPPMA SYVEEPQGNV CASSSLSSQQ GSMGFEAAKS 420 LSCSTSKSPS SSPGDSRENG K

Sequence ? help Back to Top

Protein Sequence Length: 441 aa Download sequence

MSLTLCSSLL PMTQPLSRAM TLWSTDEERM KRTKAEMREV REENERLKKR LDETMKNYET  60
LKRQLQLHEM GQLREPKKST QTTAIAIRNH EVEEMDQVVS LTLGRRLFNN ISSPTKSDPQ  120
NVGFLGLPAP PTGEDELSRH NPPKKPRVSV RARCDAPMND GCQWRKYGQK TAKGNPCPRA  180
YYRCTSAPSC PVRKQVQMSV DDISILITTY EGTHNHPLPV SAMAMASTTS AAASMLLSGP  240
SSFATAAANL HGLNSYLSNN TNSKGFYLPN SSTLSSSLNH PTITLDLTSN SPSTNYLPKF  300
PLDFGSSQYS FMPWNNSNSG YGYGNANQAG HQQFSKSSTP PPPLSSPLPD TIAAATKAIT  360
SDPNFHSALA AALSSIIGGG NGSKTAPPMA SYVEEPQGNV CASSSLSSQQ GSMGFEAAKS  420
LSCSTSKSPS SSPGDSRENG K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	6e-49	WRKY family protein