PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023515670.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

WRKY

Protein Properties

Length: 444aa MW: 47951.8 Da PI: 9.147

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023515670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.6	3.5e-30	161	220	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+YYrCtsa +Cpv+k+v+ s +d +++++tYeg+Hnh+ XP_023515670.1 161 MNDGCQWRKYGQKTAKGNPCPRAYYRCTSApSCPVRKQVQMSVDDISILITTYEGTHNHP 220 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MSLTLCSSLL PMTQPLSRAM TLWSTDEERM KRTKAEMREV REENERLKKR LDETMKNYET 60 LKRQLQLHEM GQLREPKKST QTTAIAIRNH EVEEMDQVVS LTLGRRLFNN ISSPTKSDPQ 120 NVGFLGLPAP PTGEDELSRH NPPKKPRVSV RARCDAPLVQ MNDGCQWRKY GQKTAKGNPC 180 PRAYYRCTSA PSCPVRKQVQ MSVDDISILI TTYEGTHNHP LPVSAMAMAS TTSAAASMLL 240 SGPSSFATAA ANLHGLNSYL SNNTNSKGFY LPNSSTLSSS LNHPTITLDL TSNSPSTNYL 300 PKFPLDFGSS QYSFMPWNNS NSGYGYGNAN QAGHQQFSKS STPPPPLSSP LPDTIAAATK 360 AITSDPNFHS ALAAALSSII GGGNGSKTAP PMASYVEEPQ GNVCASSSLS SQQGSMGFEA 420 AKSLSCSTSK SPSSSPGDSR ENGK

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MSLTLCSSLL PMTQPLSRAM TLWSTDEERM KRTKAEMREV REENERLKKR LDETMKNYET  60
LKRQLQLHEM GQLREPKKST QTTAIAIRNH EVEEMDQVVS LTLGRRLFNN ISSPTKSDPQ  120
NVGFLGLPAP PTGEDELSRH NPPKKPRVSV RARCDAPLVQ MNDGCQWRKY GQKTAKGNPC  180
PRAYYRCTSA PSCPVRKQVQ MSVDDISILI TTYEGTHNHP LPVSAMAMAS TTSAAASMLL  240
SGPSSFATAA ANLHGLNSYL SNNTNSKGFY LPNSSTLSSS LNHPTITLDL TSNSPSTNYL  300
PKFPLDFGSS QYSFMPWNNS NSGYGYGNAN QAGHQQFSKS STPPPPLSSP LPDTIAAATK  360
AITSDPNFHS ALAAALSSII GGGNGSKTAP PMASYVEEPQ GNVCASSSLS SQQGSMGFEA  420
AKSLSCSTSK SPSSSPGDSR ENGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	9e-49	WRKY family protein