PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023515261.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

G2-like

Protein Properties

Length: 562aa MW: 62028.9 Da PI: 6.2815

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023515261.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	91.1	9.7e-29	103	156	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_023515261.1 103 KPRVVWSVELHQQFVAAVKQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 156 79*****************.******************************8 PP
2	Myb_DNA-binding	43.6	6.6e-14	105	155	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v avkqlG + +k+I + m+ g+t++++ s++qky+ XP_023515261.1 105 RVVWSVELHQQFVAAVKQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 155 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MSADDGKNVV MKGVIHGACD YLIKPVRIEA LRNIWQHVVR KRKTEWKDLE QSGSVDEGDR 60 EKNPSEGANY SSSVYEGSWN SSKRRRDTEE EAEERDDTST LKKPRVVWSV ELHQQFVAAV 120 KQLGIDKAVP KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSSSHSL QCNLNNSFMN 180 PQDPPFGPMA SFNGIDLQTL SVTGHLSPQS LAALQATEFR RPATAKSSMS MALVDQNNLF 240 SFENPKLRFV DDQTPHLNNS KPINLFHGIP TKMEPKQLAI MHPSVQTQGN INMPLNIKTE 300 HGGTQLMHHL SHQQTGGQAL SNSPASHLPR ISSSFPIISG SITSRNGTAD STQGPGYNLV 360 SPASLMMNFP MNQLTELSNN FSLPSDSTVS TLTCKGVFQE EISSDLHGSD GLMSSYDVFN 420 DLHLQKSHDW DSQNVGSFAF GTSHHGNFIQ DSFDVSPSTL IHHGFPPSQT NGQNHNSSSS 480 GKTIFPFSDA TQPENAQSNA EKLPLDPGDV KPQRIPDASY QTDLLPENFG QDELLSVFLK 540 QEQQGDNGSV DFSGYQTENI CV

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MSADDGKNVV MKGVIHGACD YLIKPVRIEA LRNIWQHVVR KRKTEWKDLE QSGSVDEGDR  60
EKNPSEGANY SSSVYEGSWN SSKRRRDTEE EAEERDDTST LKKPRVVWSV ELHQQFVAAV  120
KQLGIDKAVP KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSSSHSL QCNLNNSFMN  180
PQDPPFGPMA SFNGIDLQTL SVTGHLSPQS LAALQATEFR RPATAKSSMS MALVDQNNLF  240
SFENPKLRFV DDQTPHLNNS KPINLFHGIP TKMEPKQLAI MHPSVQTQGN INMPLNIKTE  300
HGGTQLMHHL SHQQTGGQAL SNSPASHLPR ISSSFPIISG SITSRNGTAD STQGPGYNLV  360
SPASLMMNFP MNQLTELSNN FSLPSDSTVS TLTCKGVFQE EISSDLHGSD GLMSSYDVFN  420
DLHLQKSHDW DSQNVGSFAF GTSHHGNFIQ DSFDVSPSTL IHHGFPPSQT NGQNHNSSSS  480
GKTIFPFSDA TQPENAQSNA EKLPLDPGDV KPQRIPDASY QTDLLPENFG QDELLSVFLK  540
QEQQGDNGSV DFSGYQTENI CV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16110.1	1e-107	ARR-B family protein