PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515221.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NF-YA
Protein Properties Length: 311aa    MW: 34775 Da    PI: 7.4682
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515221.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.21.1e-32150205258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh hA+rR+RgsgGrF
  XP_023515221.1 150 EPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHLHAMRRARGSGGRF 205
                     8****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MPSKPGIVEQ EAADGAKYLL QSTKYSEPWW HGVGNNTITD EDATKTSSAE YLNVTVTSAA  60
MLSQANDENT GQEVQHLKYI PFSTSPPVGE RLDPNSQMEL VGHSIVLTSY PFSDAQCCQM  120
LTSYGPQTTL PHFYGLHHAR MPLPLEMEAE PVYVNAKQYH GILRRRQSRA KAELEKKVIK  180
SRKPYLHESR HLHAMRRARG SGGRFLNTKK PNSVISNKTM EEDINSSINH VSEPVSEGRS  240
NYMVANENGM KDTLDDQQKE DKEFMPQNMQ ITHAFFNGGK SNGHGLSTYN SKLADESIQV  300
NAAPQRAIPI K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.17e-42NF-YA family protein