PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023515141.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 136aa    MW: 14624.8 Da    PI: 9.8232
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023515141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.25.2e-194071132
            GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrk 32
                    C++C+tt TplWR gp g+++LCnaCG++yrk
  XP_023515141.1 40 CHHCRTTRTPLWRAGPAGPRSLCNACGIRYRK 71
                    *******************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    
MAFFINNHPD LSGSTFNPSS LMAISNHGLL CIEPQKQRTC HHCRTTRTPL WRAGPAGPRS  60
LCNACGIRYR KLKNSNGGVN KSGNGKKVVR VVDLGREIML HRATAAMAEN GGAETIGEEE  120
QAAAMLLMAL SSGYVS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.12e-14GATA family protein