PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514954.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 343aa    MW: 38659.6 Da    PI: 8.4474
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514954.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.26.9e-28184244259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     dDg++WrKYGqKe+ gs+fpr+Y+rCt++   +Cp+kk+v+r ++dp+++e+ Y g+H+++
  XP_023514954.1 184 DDGFTWRKYGQKEILGSRFPRGYFRCTHQklyHCPAKKHVQRLDHDPHTFEVAYLGDHTCH 244
                     8****************************9999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    
MPYHTYIPLP YHTIPYIYIY IYIYICWRSS ISLHYWAMEV NPGMEEALSL ILRGCSLARD  60
FESNPLNFRN NINFLARFCD EILGVFSAAK ERLSRPQNEC LRTSTSQSMD LPRIQIRPPP  120
PPFDDSGNLP PMGFGSSSSS YSSYSSYSSY SSTSTKARRR KDGMAKRTVR VAAPRIGNTE  180
LPPDDGFTWR KYGQKEILGS RFPRGYFRCT HQKLYHCPAK KHVQRLDHDP HTFEVAYLGD  240
HTCHMSATAP SAPPPPSTLP EVAGLHMTQF PPSSAGWLSM EYGGPATVRS SKDVGDQFPV  300
LDMVDAMFNS GTGSSNSVDS IFGANVGEEQ HQHHKWEKDN KKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.11e-45WRKY family protein