PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023514777.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | C2H2 | ||||||||
Protein Properties | Length: 443aa MW: 48337.6 Da PI: 9.0315 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.4 | 1.2e-05 | 66 | 88 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_023514777.1 66 FVCEICNKGFQRDQNLQLHRRGH 88 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.4 | 0.00097 | 143 | 165 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_023514777.1 143 WKCDKCSKKYAVQSDWKAHSKIC 165 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 443 aa Download sequence |
MMKGSFLSQQ HQQQLLMDQT LSNLTNPTQF FSPPPPKRKR NLAGNPDPDA EVIALSPKTL 60 MATNRFVCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRSNK EVIKKKVYVC PEPSCVHHDP 120 SRALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA HSKICGTKEY KCDCGTLFSR 180 RDSFITHRAF CDALADESAR SAMTLSPLIS NYNNSQELLF KRGFGGGDNS NNDDNNLKTE 240 IPSWLQSDEI FVGSTHQTLN PNPNGLVPPC VSSPHISATA LLQKAAQMGA TMSSGSMGRT 300 HEMVHVSTGN YGDMGIRSRE GGMGVSCSSS SCCTDYGNKA AAVSAAVSAT ATPSGPTTFL 360 HDMINSLASA SHPFHQDSSA FNAAAFAAMH HHTAAGRSDG LTRDFLGLRP LSHGDILSIT 420 GFGNCIVPNS ATLQSQTQKP WQG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 1e-106 | C2H2 family protein |