PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023514413.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | bHLH | ||||||||
Protein Properties | Length: 531aa MW: 57729.1 Da PI: 5.3754 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 44.9 | 2.1e-14 | 319 | 365 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn Err RdriN+++ L+el+P + K +Ka++L +A+eY+k Lq XP_023514413.1 319 VHNLSERRHRDRINEKMKALQELIPRC-----NKTDKASMLDEAIEYLKTLQ 365 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 531 aa Download sequence |
MIGRLRMNHC VPDFEMADDF SLPTFSSLTR PRKSSMPDDD VVELLWQNGQ VVAHSQNQRS 60 VRKSPPSKFD VSIPQDQTAA VAAREIRPSS QLEEPHDLFM QEDEMASWLN YPLVEDHNFC 120 SDLLFPSMTA SLCGNSQTEP RPSATATVTL TQGPPTRLEK QSSVQFSRNR ATVESEPSNS 180 KAMVREATVV DSCDTPSVGP ESRASEIARR KLAEAVNGAD VWRETVCGSD GGGGASVSGD 240 GVGEKELVTC EMTVTSSPGG SSASAEPAAP KLAADDRKRK GRAPDDTECQ SEDVEYESTD 300 PKKQLRGSTS MKRSRAAEVH NLSERRHRDR INEKMKALQE LIPRCNKTDK ASMLDEAIEY 360 LKTLQLQVQM MSMGCGMMPM MFPGVQQYLP PPMGMGIGMG MGMGMEMGMN RPMMQFPNLL 420 AGSNLPMQAG AAAAAAAHLG QRFPLPAFAM PPVPGSNPSQ AQAMNNQPDP IVNPAGTQNT 480 TPPPVSGFPD SYQQFLSSNQ VQFHIAQAVQ NQQPVQPNTS RPCTDRNPKN L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20180.2 | 7e-65 | bHLH family protein |