PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023514235.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

BES1

Protein Properties

Length: 740aa MW: 82500.9 Da PI: 5.8654

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023514235.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	137.5	1.3e-42	115	252	1	131
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl......eeaeaagssasas 89 gg++r ++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL++eAGwvv +DGtt++ s+ + ++a a ss+ as XP_023514235.1 115 GGGRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALATEAGWVVLPDGTTFPSRSQVPkpanggSAAVASSSSHMAS 209 68999****************************************************************94444332445433334444445566 PP DUF822 90 pesslq.sslkssalaspvesysaspksssfpspssldsisla 131 +++ + ++ + + +s e+ ++++k + +p + +d ++a XP_023514235.1 210 RQTPPSsTRGVGCGSKSLPENNACRMKGVFMPNSPPYDASPNA 252 6676665666778888888999999999999999888887765 PP

Sequence ? help Back to Top
Protein Sequence Length: 740 aa Download sequence
MCEEISWFQA LETCVPSAGA GRACAMKIKR DVLKCTFSCQ LCREVQAHSG SGTSEEDDDE 60 DVEMDVKEED GEEDDGERRI RTSLIVGDDG GMVSSGSNNN QFEQHHVQEQ LGTPGGGRRC 120 RPLEEKERTK LRERHRRAIT ARILAGLRRH GNYNLRVRAD INDVIAALAT EAGWVVLPDG 180 TTFPSRSQVP KPANGGSAAV ASSSSHMASR QTPPSSTRGV GCGSKSLPEN NACRMKGVFM 240 PNSPPYDASP NARCQSSSLV GDAGEQSASH PLISSSVDVV DGMQIVEMTP KLPERDFAGS 300 AYIPVYVMLP LGVINMKCEL VDPDGLLKQL RLLKSVNIDG VMVDCWWGIV EAHSPQEYNW 360 NGYRRLFQMV HELKLKLQVV LSFHECGGNV GDDVCIPLPH WVAEIGRSNP DIFFTDREGR 420 RNPECLSWGV DKERVLKGRT GLEVYFDYMR SFRVEFNDFF EDGVITTIEV GLGPCGELRF 480 PSCPVKHGWR YPGIGEFQCY DQYLLKYLRK AAEARGHSFW ARGPDNAGSY SSRPHETGFF 540 CDGGDYDGYY GRFFLNWYSQ VLVDHGDLVL YLAKLAFEGT HIVAKLSGIH WWYKTASHAA 600 ELTAGFYNPC NRDGYAAIMA MLKKHSASLN FTSAGFHMLD QQENIANTSS DPEAVVWQVT 660 YAARDVGVEV VSENALPFLD RVGYNKILDN AKPLDDPDGR YLSSFIYNKL TPLLLERHNL 720 VEFERFVKRM HGESVHDLQV

Sequence ? help Back to Top

Protein Sequence Length: 740 aa Download sequence

MCEEISWFQA LETCVPSAGA GRACAMKIKR DVLKCTFSCQ LCREVQAHSG SGTSEEDDDE  60
DVEMDVKEED GEEDDGERRI RTSLIVGDDG GMVSSGSNNN QFEQHHVQEQ LGTPGGGRRC  120
RPLEEKERTK LRERHRRAIT ARILAGLRRH GNYNLRVRAD INDVIAALAT EAGWVVLPDG  180
TTFPSRSQVP KPANGGSAAV ASSSSHMASR QTPPSSTRGV GCGSKSLPEN NACRMKGVFM  240
PNSPPYDASP NARCQSSSLV GDAGEQSASH PLISSSVDVV DGMQIVEMTP KLPERDFAGS  300
AYIPVYVMLP LGVINMKCEL VDPDGLLKQL RLLKSVNIDG VMVDCWWGIV EAHSPQEYNW  360
NGYRRLFQMV HELKLKLQVV LSFHECGGNV GDDVCIPLPH WVAEIGRSNP DIFFTDREGR  420
RNPECLSWGV DKERVLKGRT GLEVYFDYMR SFRVEFNDFF EDGVITTIEV GLGPCGELRF  480
PSCPVKHGWR YPGIGEFQCY DQYLLKYLRK AAEARGHSFW ARGPDNAGSY SSRPHETGFF  540
CDGGDYDGYY GRFFLNWYSQ VLVDHGDLVL YLAKLAFEGT HIVAKLSGIH WWYKTASHAA  600
ELTAGFYNPC NRDGYAAIMA MLKKHSASLN FTSAGFHMLD QQENIANTSS DPEAVVWQVT  660
YAARDVGVEV VSENALPFLD RVGYNKILDN AKPLDDPDGR YLSSFIYNKL TPLLLERHNL  720
VEFERFVKRM HGESVHDLQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45880.1	0.0	BES1 family protein