PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023514217.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family C3H
Protein Properties Length: 403aa    MW: 45429.2 Da    PI: 6.154
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023514217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.13.1e-083252526
                    --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                     C ++++ G C +G+rC++ H+
  XP_023514217.1 32 VCTYYQK-GRCAFGSRCRYDHV 52
                    6******.*************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MWVLCKYFAH GACLKGEYCE FSHDWTAPPS NVCTYYQKGR CAFGSRCRYD HVKVSHAESS  60
ASSNSQQPHV SESVSIAHTL LSSPLSPSPE STIELAGSKI SCLPSHVESA WSVECELPSG  120
LDDWGSRETR IISPADLPIC SFSAAGTNCP RGDNCPHIHG DLCPTCGKQC LHPFRTDERE  180
EHMKACEKKQ KHLESLKHSQ EIECSVCLER VLSKTEIAER KFGLLSECDH PFCISCIRNW  240
RNSSSTSGMD VNSALRACPI CRKLSYFVIP SVIWYSSKEE KQEIVDSYKS KLRSIDCKHF  300
NFGNGNCPFG SSCFYKHLVK PGSYTWKYHR PPPPRPRSQR TPPSRSNIVD MDAFFDMFED  360
LEDLDFSAED LDFEDLTPLE MAFVLMQLGC EANLSSDEEN YSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-133C3H family protein