PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513996.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 277aa    MW: 31250.1 Da    PI: 7.0241
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513996.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.21.7e-16230263132
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrk 32 
                     C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ 
  XP_023513996.1 230 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWAN 263
                     *****99999**********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MDGIHASDGR MHMSHAQHSM HTQSVQEQEH HDLHYMSNGN GMADEHENEG HGIMVVEREA  60
PSDHGDLAEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDSVS PEKVQAVLLL LGGREVPLRV  120
PSIPITNQPN DRHLTDEAFN QALAIPPRLS VPQRLASLIR FREKRKERNF DKKIRYTVRK  180
EVALRMQRNK GQFTSSKPIQ EDSLSATTSW ESNETWCSDG NGSHQQEILC RHCGISEKST  240
PMMRRGPDGP RTLCNACGLM WANKVYFFCI GQSSARL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-110GATA family protein