PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513995.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 293aa    MW: 32678.4 Da    PI: 7.1709
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513995.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA49.84.8e-16221257135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ kg+
  XP_023513995.1 221 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWANKGT 257
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDGIHASDGR MHMSHAQHSM HTQSVQEQEH HDLHYMSNGN GMADEHENEG HGIMVVEREA  60
PSDHGDLAEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDSVS PEKVQAVLLL LGGREVPLRV  120
PSIPITNQPN DRALAIPPRL SVPQRLASLI RFREKRKERN FDKKIRYTVR KEVALRMQRN  180
KGQFTSSKPI QEDSLSATTS WESNETWCSD GNGSHQQEIL CRHCGISEKS TPMMRRGPDG  240
PRTLCNACGL MWANKGTLRD LSKAPNQGGQ ASSFNRNENV VQNGDSESNP KSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-120GATA family protein