PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513994.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 302aa    MW: 33734.5 Da    PI: 6.8813
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513994.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.62.6e-16230266135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgpdg++tLCnaCGl+++ kg+
  XP_023513994.1 230 CRHCGISEksTPMMRRGPDGPRTLCNACGLMWANKGT 266
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MDGIHASDGR MHMSHAQHSM HTQSVQEQEH HDLHYMSNGN GMADEHENEG HGIMVVEREA  60
PSDHGDLAEN RGVMVDRGGD NCDQLTLSYQ GQVYVFDSVS PEKVQAVLLL LGGREVPLRV  120
PSIPITNQPN DRHLTDEAFN QALAIPPRLS VPQRLASLIR FREKRKERNF DKKIRYTVRK  180
EVALRMQRNK GQFTSSKPIQ EDSLSATTSW ESNETWCSDG NGSHQQEILC RHCGISEKST  240
PMMRRGPDGP RTLCNACGLM WANKGTLRDL SKAPNQGGQA SSFNRNENVV QNGDSESNPK  300
SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.21e-118GATA family protein