PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513991.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | TCP | ||||||||
Protein Properties | Length: 250aa MW: 25831.6 Da PI: 10.5046 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 123.4 | 2.6e-38 | 33 | 126 | 3 | 93 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg....kaaks 93 +kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++a+++ ++s s+ ++ s + ++ +s XP_023513991.1 33 VKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPANFS-SVSLSVRGNGGSTSlsspSSTTS 126 79******************************************************************888.23333333322222322222222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MSNSDSGNTN GVSNGAAIDT PKNQPSSNGA LVVKKPPSKD RHSKVDGRGR RIRMPIICAA 60 RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTTPA NFSSVSLSVR GNGGSTSLSS 120 PSSTTSTLSL SRPQALSGPT PFILGKRVRS DDDGGKDDGS GVGPTGPGGY WAVPARPDYG 180 QVWSFAAAAP SEMVVQPGGI SQQASLFAQP QQPIREASAA RVGNYLPSHL NLLASLSGGG 240 GSGRREDDPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23280.1 | 5e-59 | TCP family protein |