PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513896.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family WRKY
Protein Properties Length: 339aa    MW: 37481.4 Da    PI: 9.7841
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.42.2e-31273330359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  XP_023513896.1 273 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCVEEPSMLIVTYEGEHNHP 330
                     99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MEEVEEANRE AVESCHKVLN LLTLALPQDR QSKIQSCLMA ETGAAVFKFR KVLCLLNSSS  60
SGLGHARVRK NRVKPPFSSS SSSSPLPQSM FLQTSSPDCR MDLLQGRNLH MGPLSLGNPC  120
LELSSNAKSC SIQQPQSTSH HFLQNRMLLN NPNPNAPQPE MVYLRSHSGI NLNFDSSSCT  180
QHTMSSTRSF ISSLSIDGSV ANLDGSGFHL IGTPRSSDQN SHHRRKCSGR GEDGSVKCGS  240
TGRCHCSKKR KHRVKRSIKV PAISNKLADI PPDDYSWRKY GQKPIKGSPH PRGYYKCSSM  300
RGCPARKHVE RCVEEPSMLI VTYEGEHNHP RIASQSENT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.13e-83WRKY family protein