PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513813.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 298aa MW: 32503.3 Da PI: 9.2691 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 42.9 | 1.1e-13 | 97 | 141 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++ G+g+W+ I+r + k+Rt+ q+ s+ qky XP_023513813.1 97 PWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKY 141 7*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 298 aa Download sequence |
MNAPRTCSLC GNNGHNSRTC PEGDGGGASG AGGFMLFGVR LTTTEGSSSF RKSVSMNNLS 60 QFDQPLSQDS NNADAGYASD DVVHPSDRCR SRKRGIPWTE EEHRLFLLGL QKVGKGDWRG 120 ISRNFVKTRT PTQVASHAQK YFLRRNNFNR RRRRSSLFDI TTDTFPSSSM EDDLVFSGHE 180 ALPPPLPPSQ PLKDNKPGNF LLKIHPVKPL PPAGDDNNAE NTISSKILRP IPMLPLSPYP 240 KFAQLNINDR TPEDPLPLTL KLSTSHPEAQ SPTAASQSSS NFQTMSGGGD SIDIVSVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G70000.2 | 7e-64 | MYB_related family protein |