PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023513750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | MYB_related | ||||||||
Protein Properties | Length: 732aa MW: 79787.2 Da PI: 6.1425 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.2 | 5.8e-16 | 24 | 68 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a k++G W +I +++g ++t+ q++s+ qk+ XP_023513750.1 24 RERWTEEEHSRFLEALKLYGRA-WQRIEEHIG-TKTAVQIRSHAQKF 68 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 732 aa Download sequence |
MDPNSSGEDL VFKTRKPYTI TKQRERWTEE EHSRFLEALK LYGRAWQRIE EHIGTKTAVQ 60 IRSHAQKFFS KLEKEALVKG IPVGQALDID IPPPRPKRKP SNPYPRKSPI SKLGANDGKL 120 STLVSSSQSK QILDLEKEPM NEATSGEEQA TNEKDTHDDN CSEVFTLSGE ANSFSLKNQN 180 SVPVQVKFND SCAFREFVPS VKEPLHEKGT RKLSELVISS ASREKLVSAE KKEALSCALS 240 GDEMQAAHNY PRNVPVHVVD GSLGANVQGS LRDASLQESA FHPSMEIQGE RSILRNPSGS 300 VSFEHQHNGP GSIYQSYPPI HPTPFTLLHP NQEHYKSVLQ MSSAFLNLIV STLQQNPAAH 360 AIASLTATCW PYVNPETSAD APTCDTEGFK TKQMNPTPSK EAIAAATVAA ATAWWAAHGL 420 PPLCSPLHSA FTSAAISAPV VQSSDACPNS ESKDKAESSL QNAALQNPQL DAEQSEVLTA 480 HQSGSKSPTH SSSDSGNGGA DANATVKPVH NEKTPAEVEF HDSNEEKRGK QVDRSSCGSN 540 TPSGSDREID ATEKNDEKEE DKELETNHPA PESSIRRSRS IGNTSESWKE VSDEVKRGRL 600 AFQALFTRDV LPQSFSPPYD VESENKENEN VEKVSQSVDK DNSGASVLDL NSNTCGTSTS 660 AIGVNNGEGE FLSIGLGNGT PKVCRTGFKP YKRCSVEAKE KRMTATSSNH SEEGGQKRLR 720 LDQKASNCCM YF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01060.3 | 4e-99 | MYB_related family protein |